Changes
On July 27, 2022 at 2:33:52 PM UTC, 851c91e4-6343-45af-967a-20a33797707e:
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Added resource salt_marsh_microbial_communities.csv to Characterization of Chandeleur Island, Louisiana, Salt Marsh Microbial Communities: A 6 year post-Deepwater Horizon Impact Study, May 2016-February 2017
f | 1 | { | f | 1 | { |
2 | "author": "Patricia Sobecky", | 2 | "author": "Patricia Sobecky", | ||
3 | "author_email": "psobecky@ua.edu", | 3 | "author_email": "psobecky@ua.edu", | ||
4 | "creator_user_id": "851c91e4-6343-45af-967a-20a33797707e", | 4 | "creator_user_id": "851c91e4-6343-45af-967a-20a33797707e", | ||
5 | "extras": [ | 5 | "extras": [ | ||
6 | { | 6 | { | ||
7 | "key": "DOI", | 7 | "key": "DOI", | ||
8 | "value": "doi:10.7266/N7V69H36" | 8 | "value": "doi:10.7266/N7V69H36" | ||
9 | }, | 9 | }, | ||
10 | { | 10 | { | ||
11 | "key": "ISO.pointOfContact", | 11 | "key": "ISO.pointOfContact", | ||
12 | "value": "Patricia Sobecky <psobecky@ua.edu>" | 12 | "value": "Patricia Sobecky <psobecky@ua.edu>" | ||
13 | }, | 13 | }, | ||
14 | { | 14 | { | ||
15 | "key": "Place Keywords", | 15 | "key": "Place Keywords", | ||
16 | "value": "Chandeleur Islands, Gulf of Mexico, Louisiana" | 16 | "value": "Chandeleur Islands, Gulf of Mexico, Louisiana" | ||
17 | }, | 17 | }, | ||
18 | { | 18 | { | ||
19 | "key": "Temporal Begin", | 19 | "key": "Temporal Begin", | ||
20 | "value": "2016-05-24" | 20 | "value": "2016-05-24" | ||
21 | }, | 21 | }, | ||
22 | { | 22 | { | ||
23 | "key": "Temporal End", | 23 | "key": "Temporal End", | ||
24 | "value": "2017-02-23" | 24 | "value": "2017-02-23" | ||
25 | }, | 25 | }, | ||
26 | { | 26 | { | ||
27 | "key": "Theme Keywords", | 27 | "key": "Theme Keywords", | ||
28 | "value": "denitrification, biodiversity, 16S rRNA amplicon | 28 | "value": "denitrification, biodiversity, 16S rRNA amplicon | ||
29 | sequencing, salt marsh, Deepwater Horizon" | 29 | sequencing, salt marsh, Deepwater Horizon" | ||
30 | }, | 30 | }, | ||
31 | { | 31 | { | ||
32 | "key": "spatial", | 32 | "key": "spatial", | ||
33 | "value": "{ \"type\": \"Polygon\", \"coordinates\": [ [ [ | 33 | "value": "{ \"type\": \"Polygon\", \"coordinates\": [ [ [ | ||
34 | -88.84147, 29.92761 ], [ -88.82931, 29.92761 ], [ -88.82931, 29.86375 | 34 | -88.84147, 29.92761 ], [ -88.82931, 29.92761 ], [ -88.82931, 29.86375 | ||
35 | ], [ -88.84147, 29.86375 ], [ -88.84147, 29.92761 ] ] ] }" | 35 | ], [ -88.84147, 29.86375 ], [ -88.84147, 29.92761 ] ] ] }" | ||
36 | } | 36 | } | ||
37 | ], | 37 | ], | ||
38 | "groups": [], | 38 | "groups": [], | ||
39 | "id": "f81a3fe9-5bad-4c02-8463-5f75bb80d2f9", | 39 | "id": "f81a3fe9-5bad-4c02-8463-5f75bb80d2f9", | ||
40 | "isopen": false, | 40 | "isopen": false, | ||
41 | "license_id": null, | 41 | "license_id": null, | ||
42 | "license_title": null, | 42 | "license_title": null, | ||
43 | "maintainer": "data@disl.org", | 43 | "maintainer": "data@disl.org", | ||
44 | "maintainer_email": "data@disl.org", | 44 | "maintainer_email": "data@disl.org", | ||
45 | "metadata_created": "2022-07-27T14:33:51.472139", | 45 | "metadata_created": "2022-07-27T14:33:51.472139", | ||
n | 46 | "metadata_modified": "2022-07-27T14:33:51.883055", | n | 46 | "metadata_modified": "2022-07-27T14:33:52.322652", |
47 | "name": | 47 | "name": | ||
48 | sland-louisiana-salt-marsh-microbial-communities-a-6-year-pon7v69h36", | 48 | sland-louisiana-salt-marsh-microbial-communities-a-6-year-pon7v69h36", | ||
49 | "notes": "### Abstract\nAs oil was deposited differentially within | 49 | "notes": "### Abstract\nAs oil was deposited differentially within | ||
50 | Chandeleur Island salt marshes, it was important to investigate the | 50 | Chandeleur Island salt marshes, it was important to investigate the | ||
51 | microbiology of oil-impacted areas as marsh vegetation is directly | 51 | microbiology of oil-impacted areas as marsh vegetation is directly | ||
52 | linked to microbe-driven ecosystem services such as denitrification, a | 52 | linked to microbe-driven ecosystem services such as denitrification, a | ||
53 | nitrogen (N) cycle pathway. Genomic DNA was extracted from the top | 53 | nitrogen (N) cycle pathway. Genomic DNA was extracted from the top | ||
54 | 0-7cm of sediment cores at six time points (May 2016, June 2016, | 54 | 0-7cm of sediment cores at six time points (May 2016, June 2016, | ||
55 | September 2016, October 2016, November 2016, February 2017) from three | 55 | September 2016, October 2016, November 2016, February 2017) from three | ||
56 | salt marsh locales within the Chandeleur Islands. Microbial community | 56 | salt marsh locales within the Chandeleur Islands. Microbial community | ||
57 | abundance and biodiversity were characterized with 16S rRNA using | 57 | abundance and biodiversity were characterized with 16S rRNA using | ||
58 | Illumina MiSeq 2x 300 bp technology for 17 samples.\n\n### | 58 | Illumina MiSeq 2x 300 bp technology for 17 samples.\n\n### | ||
59 | Purpose\nThis 16S rRNA amplicon dataset is a 6 year post-Deepwater | 59 | Purpose\nThis 16S rRNA amplicon dataset is a 6 year post-Deepwater | ||
60 | Horizon impact study which aimed to characterize the microbial | 60 | Horizon impact study which aimed to characterize the microbial | ||
61 | biodiversity of three salt marsh locales within the Chandeleur | 61 | biodiversity of three salt marsh locales within the Chandeleur | ||
62 | Islands.\n\n**DOI: | 62 | Islands.\n\n**DOI: | ||
63 | [doi:10.7266/N7V69H36](https://www.doi.org/10.7266/N7V69H36)**\n\n### | 63 | [doi:10.7266/N7V69H36](https://www.doi.org/10.7266/N7V69H36)**\n\n### | ||
64 | Suggested Citation\nSobecky, Patricia; Flournoy, Nikaela. 2018. | 64 | Suggested Citation\nSobecky, Patricia; Flournoy, Nikaela. 2018. | ||
65 | Characterization of Chandeleur Island, Louisiana, Salt Marsh Microbial | 65 | Characterization of Chandeleur Island, Louisiana, Salt Marsh Microbial | ||
66 | Communities: A 6 year post-Deepwater Horizon Impact Study, May | 66 | Communities: A 6 year post-Deepwater Horizon Impact Study, May | ||
67 | 2016-February 2017. Distributed by: Gulf of Mexico Research Initiative | 67 | 2016-February 2017. Distributed by: Gulf of Mexico Research Initiative | ||
68 | Information and Data Cooperative (GRIIDC), Harte Research Institute, | 68 | Information and Data Cooperative (GRIIDC), Harte Research Institute, | ||
69 | Texas A&M University\u2013Corpus Christi. doi:10.7266/N7V69H36\n\n### | 69 | Texas A&M University\u2013Corpus Christi. doi:10.7266/N7V69H36\n\n### | ||
70 | Related Publication Citation\n[Tatariw, C., Flournoy, N., Kleinhuizen, | 70 | Related Publication Citation\n[Tatariw, C., Flournoy, N., Kleinhuizen, | ||
71 | A. A., Tollette, D., Overton, E. B., Sobecky, P. A., & Mortazavi, B. | 71 | A. A., Tollette, D., Overton, E. B., Sobecky, P. A., & Mortazavi, B. | ||
72 | (2018). Salt marsh denitrification is impacted by oiling intensity six | 72 | (2018). Salt marsh denitrification is impacted by oiling intensity six | ||
73 | years after the Deepwater Horizon oil spill. Environmental Pollution, | 73 | years after the Deepwater Horizon oil spill. Environmental Pollution, | ||
74 | 243, 1606\u20131614. | 74 | 243, 1606\u20131614. | ||
75 | 09.034\n](https://dx.doi.org/10.1016/j.envpol.2018.09.034)\n\n**Funded | 75 | 09.034\n](https://dx.doi.org/10.1016/j.envpol.2018.09.034)\n\n**Funded | ||
76 | by:** Gulf of Mexico Research Initiative (GoMRI)\n\n**Funding cycle:** | 76 | by:** Gulf of Mexico Research Initiative (GoMRI)\n\n**Funding cycle:** | ||
77 | RFP-IV\n\n**Research group:** Alabama Center for Ecological Resilience | 77 | RFP-IV\n\n**Research group:** Alabama Center for Ecological Resilience | ||
78 | (ACER)\n\n", | 78 | (ACER)\n\n", | ||
n | 79 | "num_resources": 1, | n | 79 | "num_resources": 2, |
80 | "num_tags": 8, | 80 | "num_tags": 8, | ||
81 | "organization": { | 81 | "organization": { | ||
82 | "approval_status": "approved", | 82 | "approval_status": "approved", | ||
83 | "created": "2022-07-22T03:25:13.329710", | 83 | "created": "2022-07-22T03:25:13.329710", | ||
84 | "description": "The Dauphin Island Sea Lab organization.", | 84 | "description": "The Dauphin Island Sea Lab organization.", | ||
85 | "id": "cb136e67-d862-4b9e-af1c-e5c564cee512", | 85 | "id": "cb136e67-d862-4b9e-af1c-e5c564cee512", | ||
86 | "image_url": "", | 86 | "image_url": "", | ||
87 | "is_organization": true, | 87 | "is_organization": true, | ||
88 | "name": "dauphin-island-sea-lab", | 88 | "name": "dauphin-island-sea-lab", | ||
89 | "state": "active", | 89 | "state": "active", | ||
90 | "title": "Dauphin Island Sea Lab", | 90 | "title": "Dauphin Island Sea Lab", | ||
91 | "type": "organization" | 91 | "type": "organization" | ||
92 | }, | 92 | }, | ||
93 | "owner_org": "cb136e67-d862-4b9e-af1c-e5c564cee512", | 93 | "owner_org": "cb136e67-d862-4b9e-af1c-e5c564cee512", | ||
94 | "private": false, | 94 | "private": false, | ||
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96 | "relationships_as_subject": [], | 96 | "relationships_as_subject": [], | ||
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123 | "state": "active", | 147 | "state": "active", | ||
124 | "tags": [ | 148 | "tags": [ | ||
125 | { | 149 | { | ||
126 | "display_name": "16S rRNA amplicon sequencing", | 150 | "display_name": "16S rRNA amplicon sequencing", | ||
127 | "id": "86e7fbd9-c370-4f1b-9ff7-6ec7950ec6cb", | 151 | "id": "86e7fbd9-c370-4f1b-9ff7-6ec7950ec6cb", | ||
128 | "name": "16S rRNA amplicon sequencing", | 152 | "name": "16S rRNA amplicon sequencing", | ||
129 | "state": "active", | 153 | "state": "active", | ||
130 | "vocabulary_id": null | 154 | "vocabulary_id": null | ||
131 | }, | 155 | }, | ||
132 | { | 156 | { | ||
133 | "display_name": "Chandeleur Islands", | 157 | "display_name": "Chandeleur Islands", | ||
134 | "id": "1187d400-d9de-4166-aca2-2e591ecf8c65", | 158 | "id": "1187d400-d9de-4166-aca2-2e591ecf8c65", | ||
135 | "name": "Chandeleur Islands", | 159 | "name": "Chandeleur Islands", | ||
136 | "state": "active", | 160 | "state": "active", | ||
137 | "vocabulary_id": null | 161 | "vocabulary_id": null | ||
138 | }, | 162 | }, | ||
139 | { | 163 | { | ||
140 | "display_name": "Deepwater Horizon", | 164 | "display_name": "Deepwater Horizon", | ||
141 | "id": "0e13401a-3910-4b7f-9e17-df754fe3f24a", | 165 | "id": "0e13401a-3910-4b7f-9e17-df754fe3f24a", | ||
142 | "name": "Deepwater Horizon", | 166 | "name": "Deepwater Horizon", | ||
143 | "state": "active", | 167 | "state": "active", | ||
144 | "vocabulary_id": null | 168 | "vocabulary_id": null | ||
145 | }, | 169 | }, | ||
146 | { | 170 | { | ||
147 | "display_name": "Gulf of Mexico", | 171 | "display_name": "Gulf of Mexico", | ||
148 | "id": "26b2a6bc-e01b-4c22-9d3f-5bbcd148cc4f", | 172 | "id": "26b2a6bc-e01b-4c22-9d3f-5bbcd148cc4f", | ||
149 | "name": "Gulf of Mexico", | 173 | "name": "Gulf of Mexico", | ||
150 | "state": "active", | 174 | "state": "active", | ||
151 | "vocabulary_id": null | 175 | "vocabulary_id": null | ||
152 | }, | 176 | }, | ||
153 | { | 177 | { | ||
154 | "display_name": "Louisiana", | 178 | "display_name": "Louisiana", | ||
155 | "id": "d7699c97-9202-4624-bb36-265d2a628a57", | 179 | "id": "d7699c97-9202-4624-bb36-265d2a628a57", | ||
156 | "name": "Louisiana", | 180 | "name": "Louisiana", | ||
157 | "state": "active", | 181 | "state": "active", | ||
158 | "vocabulary_id": null | 182 | "vocabulary_id": null | ||
159 | }, | 183 | }, | ||
160 | { | 184 | { | ||
161 | "display_name": "biodiversity", | 185 | "display_name": "biodiversity", | ||
162 | "id": "16737851-e341-4f85-a496-dd82131afef6", | 186 | "id": "16737851-e341-4f85-a496-dd82131afef6", | ||
163 | "name": "biodiversity", | 187 | "name": "biodiversity", | ||
164 | "state": "active", | 188 | "state": "active", | ||
165 | "vocabulary_id": null | 189 | "vocabulary_id": null | ||
166 | }, | 190 | }, | ||
167 | { | 191 | { | ||
168 | "display_name": "denitrification", | 192 | "display_name": "denitrification", | ||
169 | "id": "ef3cdb87-1cb1-463e-b2d0-5d94ea0794b0", | 193 | "id": "ef3cdb87-1cb1-463e-b2d0-5d94ea0794b0", | ||
170 | "name": "denitrification", | 194 | "name": "denitrification", | ||
171 | "state": "active", | 195 | "state": "active", | ||
172 | "vocabulary_id": null | 196 | "vocabulary_id": null | ||
173 | }, | 197 | }, | ||
174 | { | 198 | { | ||
175 | "display_name": "salt marsh", | 199 | "display_name": "salt marsh", | ||
176 | "id": "5c257f3f-a48e-47b6-a1cc-4113dc5cea33", | 200 | "id": "5c257f3f-a48e-47b6-a1cc-4113dc5cea33", | ||
177 | "name": "salt marsh", | 201 | "name": "salt marsh", | ||
178 | "state": "active", | 202 | "state": "active", | ||
179 | "vocabulary_id": null | 203 | "vocabulary_id": null | ||
180 | } | 204 | } | ||
181 | ], | 205 | ], | ||
182 | "title": "Characterization of Chandeleur Island, Louisiana, Salt | 206 | "title": "Characterization of Chandeleur Island, Louisiana, Salt | ||
183 | Marsh Microbial Communities: A 6 year post-Deepwater Horizon Impact | 207 | Marsh Microbial Communities: A 6 year post-Deepwater Horizon Impact | ||
184 | Study, May 2016-February 2017", | 208 | Study, May 2016-February 2017", | ||
185 | "type": "dataset", | 209 | "type": "dataset", | ||
186 | "url": null, | 210 | "url": null, | ||
187 | "version": null | 211 | "version": null | ||
188 | } | 212 | } |